@prefix this: <https://w3id.org/np/RA-nCGvmh7Euq3SJlMWepvPMIHGoSMBBvvKIQOTiHXRC0> .
@prefix sub: <https://w3id.org/np/RA-nCGvmh7Euq3SJlMWepvPMIHGoSMBBvvKIQOTiHXRC0/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  sub:get-biochementity-info a <https://w3id.org/kpxl/grlc/grlc-query>;
    dct:description "Key-value Info table for a biochementity (a chemical entity defined as a subclass of BioChemEntity). Finds the entity's latest defining nanopub ('partid', signed by an owning-resource member pubkey 'pubkey', not invalidated) and shows every field the biochementity template allows: the name (and its Dutch nl-be variant), alternative names, type, superclasses, metabolite/isomer relations, chemical roles, external identifiers, group labels, context-specific aliases, comment, the vocabulary it is part of, and the defining nanopub. Multi-valued properties are shown as one cell with several values; linked entities defined on the network are shown by their label; rows for optional fields are omitted when absent.";
    dct:license <http://www.apache.org/licenses/LICENSE-2.0>;
    rdfs:label "Get biochementity info";
    <https://w3id.org/kpxl/grlc/endpoint> <https://w3id.org/np/l/nanopub-query-1.1/repo/full>;
    <https://w3id.org/kpxl/grlc/sparql> """prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#>
prefix dct: <http://purl.org/dc/terms/>
prefix schema: <http://schema.org/>
prefix skos: <http://www.w3.org/2004/02/skos/core#>
prefix owl: <http://www.w3.org/2002/07/owl#>
prefix obo: <http://purl.obolibrary.org/obo/>
prefix pehterms: <https://w3id.org/peh/terms/>
prefix np: <http://www.nanopub.org/nschema#>
prefix npa: <http://purl.org/nanopub/admin/>
prefix npx: <http://purl.org/nanopub/x/>

select ?Property_noheader ?Property_label (group_concat(distinct replace(str(?disp), '[\\r\\n]+', ' '); separator='\\n') as ?Value_multi_val_noheader) where {
  values ?__pubkey_multi {}
  graph npa:graph {
    ?dnp npa:hasValidSignatureForPublicKeyHash ?__pubkey_multi ;
         (npx:introduces|npx:describes|npx:embeds) ?_partid_iri ;
         dct:created ?ddate ;
         np:hasAssertion ?da .
    filter not exists { ?inv npx:invalidates ?dnp ; npa:hasValidSignatureForPublicKeyHash ?__pubkey_multi . }
    filter not exists {
      ?dnp2 npa:hasValidSignatureForPublicKeyHash ?pk2 ;
            (npx:introduces|npx:describes|npx:embeds) ?_partid_iri ;
            dct:created ?ddate2 .
      filter not exists { ?inv2 npx:invalidates ?dnp2 ; npa:hasValidSignatureForPublicKeyHash ?pk2 . }
      filter(?ddate2 > ?ddate)
    }
  }
  {
    graph ?da { ?_partid_iri rdfs:label ?v . filter(lang(?v) = '') }
    bind(1 as ?ord) bind(rdfs:label as ?Property_noheader) bind('Name:' as ?Property_label)
    bind(str(?v) as ?disp)
  } union {
    graph ?da { ?_partid_iri rdfs:label ?v . filter(lang(?v) = 'nl-be') }
    bind(2 as ?ord) bind(rdfs:label as ?Property_noheader) bind('Name (Dutch):' as ?Property_label)
    bind(str(?v) as ?disp)
  } union {
    graph ?da { ?_partid_iri schema:alternateName ?v }
    bind(3 as ?ord) bind(schema:alternateName as ?Property_noheader) bind('Alternative names:' as ?Property_label)
    bind(if(lang(?v) = 'nl-be', concat(str(?v), ' (nl)'), str(?v)) as ?disp)
  } union {
    graph ?da { ?_partid_iri rdf:type ?v }
    bind(4 as ?ord) bind(rdf:type as ?Property_noheader) bind('Type:' as ?Property_label)
    bind(concat('<a href=\"', str(?v), '\">', replace(str(?v), '^.*[/#]', ''), '</a>') as ?disp)
  } union {
    graph ?da { ?_partid_iri rdfs:subClassOf ?v }
    optional { graph npa:graph { ?vnp npx:introduces ?v ; np:hasAssertion ?vaa . } graph ?vaa { ?v rdfs:label ?vlab . filter(lang(?vlab) = '') } }
    bind(5 as ?ord) bind(rdfs:subClassOf as ?Property_noheader) bind('Subclass of:' as ?Property_label)
    bind(concat('<a href=\"', str(?v), '\">', coalesce(?vlab, replace(str(?v), '^.*[/#]', '')), '</a>') as ?disp)
  } union {
    graph ?da { ?_partid_iri pehterms:isMetaboliteOf ?v }
    optional { graph npa:graph { ?vnp npx:introduces ?v ; np:hasAssertion ?vaa . } graph ?vaa { ?v rdfs:label ?vlab . filter(lang(?vlab) = '') } }
    bind(6 as ?ord) bind(pehterms:isMetaboliteOf as ?Property_noheader) bind('Is metabolite of:' as ?Property_label)
    bind(concat('<a href=\"', str(?v), '\">', coalesce(?vlab, replace(str(?v), '^.*[/#]', '')), '</a>') as ?disp)
  } union {
    graph ?da { ?_partid_iri pehterms:isIsomerOf ?v }
    optional { graph npa:graph { ?vnp npx:introduces ?v ; np:hasAssertion ?vaa . } graph ?vaa { ?v rdfs:label ?vlab . filter(lang(?vlab) = '') } }
    bind(7 as ?ord) bind(pehterms:isIsomerOf as ?Property_noheader) bind('Is isomer of:' as ?Property_label)
    bind(concat('<a href=\"', str(?v), '\">', coalesce(?vlab, replace(str(?v), '^.*[/#]', '')), '</a>') as ?disp)
  } union {
    graph ?da { ?_partid_iri obo:RO_0000087 ?v }
    bind(8 as ?ord) bind(obo:RO_0000087 as ?Property_noheader) bind('Has role:' as ?Property_label)
    bind(concat('<a href=\"', str(?v), '\">', replace(str(?v), '^.*[/#]', ''), '</a>') as ?disp)
  } union {
    graph ?da { ?_partid_iri skos:exactMatch ?v }
    bind(9 as ?ord) bind(skos:exactMatch as ?Property_noheader) bind('External identifiers:' as ?Property_label)
    bind(if(regex(str(?v), '^https?://'), concat('<a href=\"', str(?v), '\">', replace(str(?v), '^.*/', ''), '</a>'), str(?v)) as ?disp)
  } union {
    graph ?da { ?_partid_iri pehterms:hasGroupLabel ?v }
    bind(10 as ?ord) bind(pehterms:hasGroupLabel as ?Property_noheader) bind('Group labels:' as ?Property_label)
    bind(str(?v) as ?disp)
  } union {
    graph ?da { ?_partid_iri pehterms:hasContextAlias ?ca . }
    optional { graph ?da { ?ca schema:alternateName ?caName } }
    optional { graph ?da { ?ca schema:identifier ?caType } }
    optional { graph ?da { ?ca pehterms:hasContext ?caCtx } }
    bind(11 as ?ord) bind(pehterms:hasContextAlias as ?Property_noheader) bind('Context aliases:' as ?Property_label)
    bind(concat(coalesce(str(?caName), '?'), coalesce(concat(' (', str(?caType), ')'), ''), coalesce(concat(' @ ', replace(str(?caCtx), '^.*/', '')), '')) as ?disp)
  } union {
    graph ?da { ?_partid_iri schema:comment ?v }
    bind(12 as ?ord) bind(schema:comment as ?Property_noheader) bind('Comment:' as ?Property_label)
    bind(str(?v) as ?disp)
  } union {
    graph ?da { ?_partid_iri dct:isPartOf ?v }
    optional { graph npa:graph { ?vnp npx:introduces ?v ; np:hasAssertion ?vaa . } graph ?vaa { ?v rdfs:label ?vlab . filter(lang(?vlab) = '') } }
    bind(13 as ?ord) bind(dct:isPartOf as ?Property_noheader) bind('Part of:' as ?Property_label)
    bind(concat('<a href=\"', str(?v), '\">', coalesce(?vlab, replace(str(?v), '^.*[/#]', '')), '</a>') as ?disp)
  } union {
    graph npa:graph { ?dnpDef np:hasAssertion ?da . }
    bind(14 as ?ord) bind(npa:viaNanopub as ?Property_noheader) bind('Defined in:' as ?Property_label)
    bind(concat('<a href=\"', str(?dnpDef), '\">', substr(replace(str(?dnpDef), '^.*/np/', ''), 1, 10), '</a>') as ?disp)
  }
}
group by ?ord ?Property_noheader ?Property_label
order by ?ord""" .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo orcid:0000-0002-1267-0234 .
}

sub:pubinfo {
  orcid:0000-0002-1267-0234 foaf:name "Tobias Kuhn" .
  
  this: dct:created "2026-07-15T06:31:06Z"^^xsd:dateTime;
    dct:creator orcid:0000-0002-1267-0234;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:embeds sub:get-biochementity-info;
    rdfs:label "Get biochementity info";
    nt:wasCreatedFromProvenanceTemplate <https://w3id.org/np/RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU>;
    nt:wasCreatedFromPubinfoTemplate <https://w3id.org/np/RA0J4vUn_dekg-U1kK3AOEt02p9mT2WO03uGxLDec1jLw>;
    nt:wasCreatedFromTemplate <https://w3id.org/np/RAEFAt-QcFK0ZhqfvlsmS10BnzGJA0xwOICZXkO-ai87k> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCwUtewGCpT5vIfXYE1bmf/Uqu1ojqnWdYxv+ySO80ul8Gu7m8KoyPAwuvaPj0lvPtHrg000qMmkxzKhYknEjq8v7EerxZNYp5B3/3+5ZpuWOYAs78UnQVjbHSmDdmryr4D4VvvNIiUmd0yxci47dTFUj4DvfHnGd6hVe5+goqdcwIDAQAB";
    npx:hasSignature "ByhGLBs3COnxWIlXSy6+6fPlq768bH2RUgyafQQ2WMhNuXaZ7RaDHnIl5W9CwIGHFaZx+W7ovdNFh+HNPXW6k81iH/+RLvytMvhG1fkYcc3gT01t8ZfFwWvk7dQCSDjUwiweZV+/ICnlab0LenndtShUyXnhQViR5AOKZ+y61SY=";
    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0000-0002-1267-0234 .
}