https://w3id.org/np/RA9F4PDBJCVZWxu7eudOusPoAEG-8UW2sP8z2QLaUY2dU
.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt
@prefix this: <https://w3id.org/np/RA9F4PDBJCVZWxu7eudOusPoAEG-8UW2sP8z2QLaUY2dU> .
@prefix sub: <https://w3id.org/np/RA9F4PDBJCVZWxu7eudOusPoAEG-8UW2sP8z2QLaUY2dU/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
sub:Head {
this: a np:Nanopublication;
np:hasAssertion sub:assertion;
np:hasProvenance sub:provenance;
np:hasPublicationInfo sub:pubinfo .
}
sub:assertion {
<http://purl.obolibrary.org/obo/NCIT_C43376> rdfs:label "Biologically-Derived Material" .
rdf:type rdfs:label "is an instance of" .
<http://www.w3.org/2003/01/geo/wgs84_pos#location> rdfs:label "has the location" .
<http://www.w3.org/ns/dcat#temporalEndDate> rdfs:label "has the end date" .
<http://www.w3.org/ns/dcat#temporalStartDate> rdfs:label "has the start date" .
<https://w3id.org/biolink/vocab/predicate> rdfs:label "refers to the relation" .
<https://w3id.org/biolink/vocab/subject> rdfs:label "refers to" .
<https://w3id.org/biolink/vocab/timepoint> rdfs:label "has the timepoint" .
sub:assertion a nt:AssertionTemplate, nt:UnlistedTemplate;
dct:description "Declares the intention to select and obtain small representative quantities of biological material or environmental material containing biological material for a specific purpose.";
rdfs:label "Declaring intention to sample biological material";
nt:hasNanopubLabelPattern "Intention to sample in ${location}";
nt:hasStatement sub:st01, sub:st02, sub:st04, sub:st05, sub:st06, sub:st07, sub:st08,
sub:st10, sub:st13, sub:st14, sub:st15, sub:st16, sub:st17;
nt:hasTag "naturalProducts" .
sub:association a nt:IntroducedResource, nt:LocalResource .
sub:endDate a nt:LiteralPlaceholder;
nt:hasDatatype xsd:date .
sub:environmentMaterial a nt:GuidedChoicePlaceholder;
rdfs:label "specify the type of environmental sample (ENVO ontology)";
nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=envo&q=" .
sub:location a nt:ExternalUriPlaceholder;
rdfs:label "GeoNames location ID (e.g. https://sws.geonames.org/2761367/ for Vienna, Austria)";
nt:hasRegex "https://sws\\.geonames\\.org/[0-9]+/" .
sub:permit a nt:ValuePlaceholder;
rdfs:label "specify the permit ID or URL" .
sub:purpose a nt:GuidedChoicePlaceholder;
rdfs:label "specify the purpose of sampling (MESH ontology)";
nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=mesh&q=" .
sub:sampling a nt:LocalResource;
rdfs:label "sampling activity" .
sub:st01 rdf:object <https://w3id.org/spaces/biodiversity/r/ontology/samplingIntention>;
rdf:predicate rdf:type;
rdf:subject sub:association .
sub:st02 rdf:object sub:sampling;
rdf:predicate <https://w3id.org/biolink/vocab/predicate>;
rdf:subject sub:association .
sub:st04 rdf:object sub:targetMaterial;
rdf:predicate <https://w3id.org/biolink/vocab/subject>;
rdf:subject sub:association .
sub:st05 rdf:object <http://purl.obolibrary.org/obo/NCIT_C43376>;
rdf:predicate rdf:type;
rdf:subject sub:targetMaterial .
sub:st06 a nt:OptionalStatement, nt:RepeatableStatement;
rdf:object sub:environmentMaterial;
rdf:predicate rdf:type;
rdf:subject sub:targetMaterial .
sub:st07 a nt:OptionalStatement, nt:RepeatableStatement;
rdf:object sub:tissueMaterial;
rdf:predicate rdf:type;
rdf:subject sub:targetMaterial .
sub:st08 rdf:object sub:location;
rdf:predicate <http://www.w3.org/2003/01/geo/wgs84_pos#location>;
rdf:subject sub:association .
sub:st10 a nt:RepeatableStatement;
rdf:object sub:purpose;
rdf:predicate <https://w3id.org/spaces/biodiversity/r/ontology/hasSamplingPurpose>;
rdf:subject sub:association .
sub:st13 a nt:OptionalStatement, nt:RepeatableStatement;
rdf:object sub:permit;
rdf:predicate <https://w3id.org/spaces/biodiversity/r/ontology/hasSamplingPermit>;
rdf:subject sub:association .
sub:st14 a nt:OptionalStatement;
rdf:object sub:timePeriod;
rdf:predicate <https://w3id.org/sciencelive/o/terms/coversTimePeriod>;
rdf:subject sub:association .
sub:st15 a nt:OptionalStatement;
rdf:object sub:startDate;
rdf:predicate <http://www.w3.org/ns/dcat#temporalStartDate>;
rdf:subject sub:timePeriod .
sub:st16 a nt:OptionalStatement;
rdf:object sub:endDate;
rdf:predicate <http://www.w3.org/ns/dcat#temporalEndDate>;
rdf:subject sub:timePeriod .
sub:st17 a nt:OptionalStatement;
rdf:object sub:timepoint;
rdf:predicate <https://w3id.org/biolink/vocab/timepoint>;
rdf:subject sub:association .
sub:startDate a nt:LiteralPlaceholder;
nt:hasDatatype xsd:date .
sub:targetMaterial a nt:LocalResource;
rdfs:label "sample material" .
sub:timePeriod a nt:LocalResource .
sub:timepoint a nt:LiteralPlaceholder;
rdfs:label "time expressed in XSD DateTime format, e.g. '2023-03-30T22:17:11Z'";
nt:hasRegex "-?([1-9]\\d\\d\\d+|0\\d\\d\\d)-(0[1-9]|1[0-2])-(0[1-9]|[12]\\d|3[01])T(([01]\\d|2[0-3]):[0-5]\\d:[0-5]\\d(\\.\\d+)?|24:00:00(\\.0+)?)(Z|[+-](0\\d|1[0-4]):[0-5]\\d)?" .
sub:tissueMaterial a nt:GuidedChoicePlaceholder;
rdfs:label "specify the type of tissue sample (BTO ontology)";
nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=bto&q=" .
<https://w3id.org/sciencelive/o/terms/coversTimePeriod> rdfs:label "covers time period" .
<https://w3id.org/spaces/biodiversity/r/ontology/hasSamplingPermit> rdfs:label "has a sampling permit" .
<https://w3id.org/spaces/biodiversity/r/ontology/hasSamplingPurpose> rdfs:label "has sampling purpose" .
<https://w3id.org/spaces/biodiversity/r/ontology/samplingIntention> rdfs:label "a sampling intention" .
}
sub:provenance {
sub:assertion prov:wasAttributedTo orcid:0000-0001-6534-6609 .
}
sub:pubinfo {
orcid:0000-0001-6534-6609 foaf:name "Mitja M. Zdouc" .
this: dct:created "2026-07-10T20:10:13.996Z"^^xsd:dateTime;
dct:creator orcid:0000-0001-6534-6609;
dct:license <https://creativecommons.org/publicdomain/zero/1.0/>;
npx:embeds sub:assertion;
npx:supersedes <https://w3id.org/np/RA5S0qAe-XO3Q0_rkMRZHGT82g7yjay_AHnQFR1K-87_4>;
npx:wasCreatedAt <https://nanodash.knowledgepixels.com/>;
rdfs:label "Declaring intention to sample biological material";
nt:wasCreatedFromProvenanceTemplate <https://w3id.org/np/RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU>;
nt:wasCreatedFromPubinfoTemplate <https://w3id.org/np/RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8>,
<https://w3id.org/np/RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw>, <https://w3id.org/np/RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI>;
nt:wasCreatedFromTemplate <https://w3id.org/np/RAhAAhrQ7o6vVphjp267_JjFBC2CxpER7NEDjLKBkX0WU/template> .
sub:sig npx:hasAlgorithm "RSA";
npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAnj9AmTE2Q7RxppglmQDLGezpd8yHXSVP7AqgUhyZ36SjaTCdhOlYhCIapxtat5RBYFjIQ5OreKs7GRf29kXtKqAsBR4skDZ10RviKdb52YvZEC+r1CsqOOuMCpG8fQhIWiD53PonxeeyjL9RXWFh1n4lGQ+Bo8qhIQQKgjEHnpwOgb+rLSg1V/K0j6DDW21ScOC1w1FGn+rgf2U3f0jnr9/EL8wV6uhUsRmVyPQF5YqoYsu1e10cxoXO3A63BZFg6GYeUWBenxlSo/8ZIM0Q/mk3Rt6W46aj9srX9o6KyQotN1Hux6QkgtG6usCaQEHr0g37Ip6NMPScT/rTfu3fZwIDAQAB";
npx:hasSignature "gJlq8qUenGAjXEoZCRlaiGyoueBGy6JjEw5wTGscS0ROGG8TnzSkd8Bpwk9zVHy8e5jmDpdHyhn92/SN7qqDRdiL7NOuJMMXb6dkR/6/EuG3WgZ1XfUN//PSdEzBY6PKt4I+1hAdNZIP0p6sJdvv2d+dIM75vp/cnyyuYv1B3mIPbnZ8iFWKLG0oZslhWq2+tvGJJabmzPJpwHf4tM9lvpLvvORRILTXMCjDhiAhm3jneWoi7Bdxh2q3XsldBI0UGrtQunzmsyiTy0XHICt0mLF4ZTwx5UOVRV+TeaCyyfbN8QFQtOEOLsGK3RT2XANGuiHrkfg/gOkK+LWnqD+LVQ==";
npx:hasSignatureTarget this:;
npx:signedBy orcid:0000-0001-6534-6609 .
}