Nanopublication

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ID

http://purl.org/np/temp/coxbase01/RAIpMzj66zqPspjNCxTSFxhlP30UC4pSCYS3UqZBy-scI

Formats

.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt

Content

@prefix this: <http://purl.org/np/temp/coxbase01/RAIpMzj66zqPspjNCxTSFxhlP30UC4pSCYS3UqZBy-scI> .
@prefix sub: <http://purl.org/np/temp/coxbase01/RAIpMzj66zqPspjNCxTSFxhlP30UC4pSCYS3UqZBy-scI/> .
@prefix schema: <http://schema.org/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix edam: <http://edamontology.org/> .
@prefix pav: <http://purl.org/pav/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix sio: <http://semanticscience.org/resource/> .
@prefix bibo: <http://purl.org/ontology/bibo/> .
@prefix prov: <http://www.w3.org/ns/prov#> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  <https://coxbase.q-gaps.de> a edam:data_0957, schema:SoftwareApplication;
    edam:has_function edam:operation_0567, edam:operation_3196;
    edam:has_topic edam:topic_0622, edam:topic_3053, edam:topic_3301, edam:topic_3673;
    schema:alternateName "CoxBase: Online Platform for Coxiella burnetii Genomic Sequences"@en;
    schema:applicationCategory "Bioinformatics"@en, "Epidemiological surveillance"@en;
    schema:codeRepository <https://github.com/foerstner-lab/CoxBase-Webapp>;
    schema:description "First platform to combine all disparate genotyping systems for Coxiella burnetii including MLVA, MST, IS1111, adaA and plasmid typing methods"@en;
    schema:featureList "Genotyping"@en, "Geographic mapping"@en, "Metadata visualization"@en,
      "Phylogenetic analysis"@en;
    schema:license "Open source"@en;
    schema:name "CoxBase"@en;
    schema:operatingSystem "Web-based"@en;
    schema:programmingLanguage "JavaScript"@en, "Python"@en;
    schema:provider <https://ror.org/01js2sh04>;
    schema:softwareVersion "1.0"@en;
    schema:url <https://coxbase.q-gaps.de>;
    sio:SIO_000216 "400"^^xsd:integer .
}

sub:provenance {
  sub:__1 a schema:Periodical;
    schema:issn "2379-5077";
    schema:name "mSystems"@en .
  
  sub:assertion prov:wasAttributedTo orcid:0000-0002-1481-2996;
    prov:wasDerivedFrom <https://doi.org/10.1128/mSystems.00403-21> .
  
  <https://doi.org/10.1128/mSystems.00403-21> a bibo:AcademicArticle, schema:ScholarlyArticle;
    bibo:doi "10.1128/mSystems.00403-21";
    schema:author orcid:0000-0002-1481-2996;
    schema:datePublished "2021"^^xsd:gYear;
    schema:isPartOf sub:__1;
    schema:name "CoxBase: an Online Platform for Epidemiological Surveillance, Visualization, Analysis, and Typing of Coxiella burnetii Genomic Sequences"@en .
}

sub:pubinfo {
  this: a npx:ExampleNanopub;
    dct:created "2026-01-10T22:00:00Z"^^xsd:dateTime;
    dct:license <https://creativecommons.org/publicdomain/zero/1.0/>;
    pav:createdBy orcid:0009-0005-7752-8203;
    rdfs:comment "This nanopublication describes CoxBase, the first comprehensive online platform combining five genotyping methods for epidemiological surveillance and analysis of Coxiella burnetii"@en;
    rdfs:label "Nanopublication: CoxBase as first integrated platform for Coxiella burnetii genotyping"@en;
    prov:wasAttributedTo orcid:0009-0005-7752-8203 .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAoSR/rqhnkTPQO8u4l2JQAemJo5cN83rT54nA5NXHUqaeu26bEjT/rsX1PCVBhhJ3cV2uu4wjI0NfcVaKPKmODSf6p579tdOykOnjbWLbxxPMe5DC5eV1ThMHsFsNU/6vCYIfS00E7wre7fnFYz7FAG7v1MZEyWeSXsHgk9jHoqQQDPqup5PHReKp1dd6J0Nht/OfSYnUancKAgIFyPhkTlThsLK5xSNyNEgiTR7pwkP5pGq2AnD6bPw4G3kiPnIpIGZNsaeIOvhn64gwbrtoJVdoun/namw6FQ7StEC5km/0evaBZc4qIextwO/s32Wru77ukblJ0Xi/YzbC0iLuIQIDAQAB";
    npx:hasSignature "BSRNCfrbtghJaz4/EwbCAADrKbOqcrcfi7NHMrNbMlVdKP9QvWYqVwBJ4jIIoO8ytzQh6TfHt4tUEWAMK2tum8bcf72v8lA8doSSP9meusDFXc/WWMX8iHhg/E/fMVhW/bBqRrp7xcp2RdfZ98D/pd8fLna+ZrygPMr1nnrR6/8p+nvcndUcS2QfnWhfCLZQsbm1v/GmOoqil78Qy2CeimFEOJH7wpuwDmdqMYsZVR/FmO07QacAGIa37H0h4VvVtCguM4Uns8uj6nCI7wxB9i2zVo1OdUrXeB2UWE+/qRU4mCG9f7U7EwIlahnyFY2uFeVnuHGuJh7gxvVQPdrxKA==";
    npx:hasSignatureTarget this: .
}