https://w3id.org/np/RAJxuRsqVa6vebHXrhVI2U4dfpTXLBGF636C2aR76mt7Q
.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt
@prefix this: <https://w3id.org/np/RAJxuRsqVa6vebHXrhVI2U4dfpTXLBGF636C2aR76mt7Q> .
@prefix sub: <https://w3id.org/np/RAJxuRsqVa6vebHXrhVI2U4dfpTXLBGF636C2aR76mt7Q/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix pav: <http://purl.org/pav/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfg: <http://www.w3.org/2004/03/trix/rdfg-1/> .
@prefix dce: <http://purl.org/dc/elements/1.1/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix npx: <http://purl.org/nanopub/x/> .
sub:Head {
this: a np:Nanopublication;
np:hasAssertion sub:assertion;
np:hasProvenance sub:provenance;
np:hasPublicationInfo sub:pubinfo .
}
sub:assertion {
<http://sandbox.rohub.org/rodl/ROs/mining_kegg_workflows/> a <http://purl.org/wf4ever/roevo#LiveRO> .
<http://w3id.org/ro-id/rohub/model#subject/-107053379> a <https://w3id.org/contentdesc#Domain>;
<http://www.w3.org/2004/02/skos/core#prefLabel> "biology" .
<http://w3id.org/ro-id/rohub/model#subject/1225315419> a <https://w3id.org/contentdesc#Expression>;
<http://www.w3.org/2004/02/skos/core#prefLabel> "metabolite-gene relation" .
<http://w3id.org/ro-id/rohub/model#subject/123536> a <https://w3id.org/contentdesc#Concept>;
<http://www.w3.org/2004/02/skos/core#prefLabel> "workflows" .
<http://w3id.org/ro-id/rohub/model#subject/126325650> a <https://w3id.org/contentdesc#Expression>;
<http://www.w3.org/2004/02/skos/core#prefLabel> "example result" .
<http://w3id.org/ro-id/rohub/model#subject/65177> a <https://w3id.org/contentdesc#Concept>;
<http://www.w3.org/2004/02/skos/core#prefLabel> "metabolite" .
<https://w3id.org/ro-id/0dd1b895-a231-4e46-9766-a4111ea704de> a <https://w3id.org/ro/terms/earth-science#Concept>;
<http://schema.org/name> "database";
<https://w3id.org/ro/terms/earth-science#normScore> "13.578500707213578";
<https://w3id.org/ro/terms/earth-science#score> "9.6" .
<https://w3id.org/ro-id/10799b5b-4786-4fe1-ba3e-116cf4f03bb6> a <https://w3id.org/ro/terms/earth-science#Lemma>;
<http://schema.org/name> "gene";
<https://w3id.org/ro/terms/earth-science#normScore> "16.28468033775633";
<https://w3id.org/ro/terms/earth-science#score> "13.5" .
<https://w3id.org/ro-id/1f711e8d-e75d-4301-8ead-96f15e58b16d> a <https://w3id.org/ro/terms/earth-science#Concept>;
<http://schema.org/name> "mining";
<https://w3id.org/ro/terms/earth-science#normScore> "7.072135785007072";
<https://w3id.org/ro/terms/earth-science#score> "5.0" .
<https://w3id.org/ro-id/390ea21e-d425-4b17-afd6-3bc2c2980b77> a <https://w3id.org/ro/terms/earth-science#Concept>;
<http://schema.org/name> "relationship";
<https://w3id.org/ro/terms/earth-science#normScore> "6.223479490806224";
<https://w3id.org/ro/terms/earth-science#score> "4.4" .
<https://w3id.org/ro-id/3fb9d320-b530-43a9-8d41-dfab6f280a44> a <https://w3id.org/ro/terms/earth-science#Concept>;
<http://schema.org/name> "gene";
<https://w3id.org/ro/terms/earth-science#normScore> "18.67043847241867";
<https://w3id.org/ro/terms/earth-science#score> "13.2" .
<https://w3id.org/ro-id/429fe7e1-35d0-42e8-bb49-48e206f1a6f0> a <https://w3id.org/ro/terms/earth-science#Phrase>;
<http://schema.org/name> "metabolites to gene";
<https://w3id.org/ro/terms/earth-science#normScore> "4.891304347826087";
<https://w3id.org/ro/terms/earth-science#score> "4.5" .
<https://w3id.org/ro-id/480c3ae2-47ad-4a73-95cb-3eba75a5274c/#enrichment_service-account-enrichment>
a <http://xmlns.com/foaf/0.1/Agent>;
<http://schema.org/name> "service-account-enrichment" .
<https://w3id.org/ro-id/480c3ae2-47ad-4a73-95cb-3eba75a5274c/> a <http://purl.org/wf4ever/ro#ResearchObject>,
<http://purl.org/wf4ever/roevo#ArchivedRO>, <http://schema.org/Dataset>;
pav:importedBy <mailto:service-account-generation-service>;
<http://purl.org/wf4ever/roevo#archivedAtTime> "2013-09-02T21:20:18.867+02:00";
<http://purl.org/wf4ever/roevo#archivedBy> "https://www.google.com/accounts/o8/id?id=AItOawmTeIQ2KATi2wWQYhEpoOQ5e06_WUKcbO4";
<http://purl.org/wf4ever/roevo#isArchiveOf> "http://sandbox.rohub.org/rodl/ROs/mining_kegg_workflows/";
<http://schema.org/author> <https://www.google.com/accounts/o8/id?id=AItOawmTeIQ2KATi2wWQYhEpoOQ5e06_WUKcbO4>;
<http://schema.org/contentSize> "25488"^^xsd:integer;
<http://schema.org/contentUrl> "https://api.rohub.org/api/ros/480c3ae2-47ad-4a73-95cb-3eba75a5274c/crate/download/";
<http://schema.org/creator> <https://www.google.com/accounts/o8/id?id=AItOawmTeIQ2KATi2wWQYhEpoOQ5e06_WUKcbO4>;
<http://schema.org/dateCreated> "2013-08-28 15:23:45.591000+00:00";
<http://schema.org/dateModified> "2025-03-05 00:56:52.630416+00:00";
<http://schema.org/datePublished> "2013-08-28 15:23:45.591000+00:00";
<http://schema.org/description> "This Research Object contains workflows, example results and example workflow runs for an experiment on relating metabolites to genes by mining the KEGG database.";
<http://schema.org/encodingFormat> "application/ld+json";
<http://schema.org/identifier> "https://w3id.org/ro-id/480c3ae2-47ad-4a73-95cb-3eba75a5274c";
<http://schema.org/license> <https://choosealicense.com/no-permission/>;
<http://schema.org/name> "Mining KEGG for metabolite-gene relations";
<https://w3id.org/ro/terms/earth-science#Concept> "https://w3id.org/ro-id/0dd1b895-a231-4e46-9766-a4111ea704de",
"https://w3id.org/ro-id/1f711e8d-e75d-4301-8ead-96f15e58b16d", "https://w3id.org/ro-id/390ea21e-d425-4b17-afd6-3bc2c2980b77",
"https://w3id.org/ro-id/3fb9d320-b530-43a9-8d41-dfab6f280a44", "https://w3id.org/ro-id/70358b51-6232-4110-bb3e-19773e7fb1a2",
"https://w3id.org/ro-id/75d9faaa-942c-48a8-a256-86719cb7c3df", "https://w3id.org/ro-id/8ebf67c5-9674-4e00-a79a-2c5ef8084bad",
"https://w3id.org/ro-id/aa861627-c5f3-4d8e-ad94-bc0578063175";
<https://w3id.org/ro/terms/earth-science#FieldOfResearch> "https://w3id.org/ro-id/7ab7f207-95e3-4e2b-92e5-c110da8e4f81",
"https://w3id.org/ro-id/ab601d89-1406-4a8c-8ec9-09c2f6b57fad";
<https://w3id.org/ro/terms/earth-science#IPTC> "https://w3id.org/ro-id/8fbc8d36-b387-427d-9b87-e95dad48ea26",
"https://w3id.org/ro-id/bf247cf0-33ed-4cb5-9160-f123818262f8";
<https://w3id.org/ro/terms/earth-science#Lemma> "https://w3id.org/ro-id/10799b5b-4786-4fe1-ba3e-116cf4f03bb6",
"https://w3id.org/ro-id/4b327b27-4142-4392-89b7-ab9e8aff2b5b", "https://w3id.org/ro-id/6e29cca3-2f48-4128-bc3e-499198d8356c",
"https://w3id.org/ro-id/7e45bdb6-1c7d-44c0-abcf-9cc000c4c4ea", "https://w3id.org/ro-id/8b66c11a-0298-4cd7-8759-e7d84b492c0d",
"https://w3id.org/ro-id/b959dbed-ecd9-477f-b331-d8ccdd1199f8", "https://w3id.org/ro-id/d25cb247-5a5f-472b-818e-9389ff6fe826";
<https://w3id.org/ro/terms/earth-science#NASA> "https://w3id.org/ro-id/707a5de5-e226-4127-9f68-c1961f412eb8",
"https://w3id.org/ro-id/b824a271-9eaa-48ea-845d-d370c3954d1b";
<https://w3id.org/ro/terms/earth-science#Phrase> "https://w3id.org/ro-id/429fe7e1-35d0-42e8-bb49-48e206f1a6f0",
"https://w3id.org/ro-id/819b0e5d-a0e2-422e-a1ae-5473fd9ec222", "https://w3id.org/ro-id/c34d71ba-a996-418c-8372-0013507a52e8",
"https://w3id.org/ro-id/c44cd593-3650-45e0-b811-d98224c33fec", "https://w3id.org/ro-id/ccf6da5f-ce5d-4adc-b38d-e619643b379e";
<https://w3id.org/ro/terms/earth-science#Sentence> "https://w3id.org/ro-id/af06faf8-8e8f-4a82-87ec-cba10c71af8e",
"https://w3id.org/ro-id/f264dda0-c3ad-4654-b458-2397d8c30171";
<https://www.w3.org/ns/iana/link-relations/relation#cite-as> "Eleni Mina. \"Mining KEGG for metabolite-gene relations.\" ROHub. Aug 28 ,2013. https://w3id.org/ro-id/480c3ae2-47ad-4a73-95cb-3eba75a5274c." .
<https://w3id.org/ro-id/480c3ae2-47ad-4a73-95cb-3eba75a5274c/ro-crate-metadata.json>
a <http://schema.org/CreativeWork>;
dct:conformsTo <https://w3id.org/ro/crate/1.1>;
<http://schema.org/about> <https://w3id.org/ro-id/480c3ae2-47ad-4a73-95cb-3eba75a5274c/> .
<https://w3id.org/ro-id/4b327b27-4142-4392-89b7-ab9e8aff2b5b> a <https://w3id.org/ro/terms/earth-science#Lemma>;
<http://schema.org/name> "KEGG";
<https://w3id.org/ro/terms/earth-science#normScore> "17.490952955367913";
<https://w3id.org/ro/terms/earth-science#score> "14.5" .
<https://w3id.org/ro-id/6e29cca3-2f48-4128-bc3e-499198d8356c> a <https://w3id.org/ro/terms/earth-science#Lemma>;
<http://schema.org/name> "metabolite";
<https://w3id.org/ro/terms/earth-science#normScore> "16.164053075995174";
<https://w3id.org/ro/terms/earth-science#score> "13.4" .
<https://w3id.org/ro-id/70358b51-6232-4110-bb3e-19773e7fb1a2> a <https://w3id.org/ro/terms/earth-science#Concept>;
<http://schema.org/name> "example";
<https://w3id.org/ro/terms/earth-science#normScore> "6.789250353606789";
<https://w3id.org/ro/terms/earth-science#score> "4.8" .
<https://w3id.org/ro-id/707a5de5-e226-4127-9f68-c1961f412eb8> a <https://w3id.org/ro/terms/earth-science#NASA>;
<http://schema.org/name> "chemistry and materials (general)";
<https://w3id.org/ro/terms/earth-science#normScore> "100.0";
<https://w3id.org/ro/terms/earth-science#score> "0.9420385956764221" .
<https://w3id.org/ro-id/75d9faaa-942c-48a8-a256-86719cb7c3df> a <https://w3id.org/ro/terms/earth-science#Concept>;
<http://schema.org/name> "experiment";
<https://w3id.org/ro/terms/earth-science#normScore> "7.779349363507779";
<https://w3id.org/ro/terms/earth-science#score> "5.5" .
<https://w3id.org/ro-id/7ab7f207-95e3-4e2b-92e5-c110da8e4f81> a <https://w3id.org/ro/terms/earth-science#FieldOfResearch>;
<http://schema.org/name> "earth sciences";
<https://w3id.org/ro/terms/earth-science#normScore> "100.0";
<https://w3id.org/ro/terms/earth-science#score> "0.5964264869689941" .
<https://w3id.org/ro-id/7e45bdb6-1c7d-44c0-abcf-9cc000c4c4ea> a <https://w3id.org/ro/terms/earth-science#Lemma>;
<http://schema.org/name> "workflow";
<https://w3id.org/ro/terms/earth-science#normScore> "18.93848009650181";
<https://w3id.org/ro/terms/earth-science#score> "15.7" .
<https://w3id.org/ro-id/819b0e5d-a0e2-422e-a1ae-5473fd9ec222> a <https://w3id.org/ro/terms/earth-science#Phrase>;
<http://schema.org/name> "metabolite-gene relation";
<https://w3id.org/ro/terms/earth-science#normScore> "10.326086956521738";
<https://w3id.org/ro/terms/earth-science#score> "9.5" .
<https://w3id.org/ro-id/8b66c11a-0298-4cd7-8759-e7d84b492c0d> a <https://w3id.org/ro/terms/earth-science#Lemma>;
<http://schema.org/name> "experiment";
<https://w3id.org/ro/terms/earth-science#normScore> "6.875753920386007";
<https://w3id.org/ro/terms/earth-science#score> "5.7" .
<https://w3id.org/ro-id/8ebf67c5-9674-4e00-a79a-2c5ef8084bad> a <https://w3id.org/ro/terms/earth-science#Concept>;
<http://schema.org/name> "workflow";
<https://w3id.org/ro/terms/earth-science#normScore> "21.64073550212164";
<https://w3id.org/ro/terms/earth-science#score> "15.3" .
<https://w3id.org/ro-id/8fbc8d36-b387-427d-9b87-e95dad48ea26> a <https://w3id.org/ro/terms/earth-science#IPTC>;
<http://schema.org/name> "Mining";
<https://w3id.org/ro/terms/earth-science#path> "Economy, business and finance/Economic sector/Metal and mineral/Mining" .
<https://w3id.org/ro-id/aa861627-c5f3-4d8e-ad94-bc0578063175> a <https://w3id.org/ro/terms/earth-science#Concept>;
<http://schema.org/name> "metabolite";
<https://w3id.org/ro/terms/earth-science#normScore> "18.246110325318245";
<https://w3id.org/ro/terms/earth-science#score> "12.9" .
<https://w3id.org/ro-id/ab601d89-1406-4a8c-8ec9-09c2f6b57fad> a <https://w3id.org/ro/terms/earth-science#FieldOfResearch>;
<http://schema.org/name> "geochemistry";
<https://w3id.org/ro/terms/earth-science#normScore> "100.0";
<https://w3id.org/ro/terms/earth-science#score> "0.5964264869689941" .
<https://w3id.org/ro-id/af06faf8-8e8f-4a82-87ec-cba10c71af8e> a <https://w3id.org/ro/terms/earth-science#Sentence>;
<http://schema.org/name> "Mining KEGG for metabolite-gene relations.";
<https://w3id.org/ro/terms/earth-science#normScore> "22.12212212212212";
<https://w3id.org/ro/terms/earth-science#score> "22.1" .
<https://w3id.org/ro-id/b824a271-9eaa-48ea-845d-d370c3954d1b> a <https://w3id.org/ro/terms/earth-science#NASA>;
<http://schema.org/name> "chemistry and materials";
<https://w3id.org/ro/terms/earth-science#normScore> "100.0";
<https://w3id.org/ro/terms/earth-science#score> "0.9420385956764221" .
<https://w3id.org/ro-id/b959dbed-ecd9-477f-b331-d8ccdd1199f8> a <https://w3id.org/ro/terms/earth-science#Lemma>;
<http://schema.org/name> "database";
<https://w3id.org/ro/terms/earth-science#normScore> "11.942098914354643";
<https://w3id.org/ro/terms/earth-science#score> "9.9" .
<https://w3id.org/ro-id/bf247cf0-33ed-4cb5-9160-f123818262f8> a <https://w3id.org/ro/terms/earth-science#IPTC>;
<http://schema.org/name> "IT-computer sciences";
<https://w3id.org/ro/terms/earth-science#path> "Science and technology/Technology and engineering/IT-computer sciences" .
<https://w3id.org/ro-id/c34d71ba-a996-418c-8372-0013507a52e8> a <https://w3id.org/ro/terms/earth-science#Phrase>;
<http://schema.org/name> "KEGG database";
<https://w3id.org/ro/terms/earth-science#normScore> "42.06521739130435";
<https://w3id.org/ro/terms/earth-science#score> "38.7" .
<https://w3id.org/ro-id/c44cd593-3650-45e0-b811-d98224c33fec> a <https://w3id.org/ro/terms/earth-science#Phrase>;
<http://schema.org/name> "example result";
<https://w3id.org/ro/terms/earth-science#normScore> "10.869565217391305";
<https://w3id.org/ro/terms/earth-science#score> "10.0" .
<https://w3id.org/ro-id/ccf6da5f-ce5d-4adc-b38d-e619643b379e> a <https://w3id.org/ro/terms/earth-science#Phrase>;
<http://schema.org/name> "example workflow";
<https://w3id.org/ro/terms/earth-science#normScore> "31.847826086956523";
<https://w3id.org/ro/terms/earth-science#score> "29.3" .
<https://w3id.org/ro-id/d25cb247-5a5f-472b-818e-9389ff6fe826> a <https://w3id.org/ro/terms/earth-science#Lemma>;
<http://schema.org/name> "Research Object";
<https://w3id.org/ro/terms/earth-science#normScore> "12.303980699638116";
<https://w3id.org/ro/terms/earth-science#score> "10.2" .
<https://w3id.org/ro-id/f264dda0-c3ad-4654-b458-2397d8c30171> a <https://w3id.org/ro/terms/earth-science#Sentence>;
<http://schema.org/name> "This Research Object contains workflows, example results and example workflow runs for an experiment on relating metabolites to genes by mining the KEGG database.";
<https://w3id.org/ro/terms/earth-science#normScore> "77.87787787787788";
<https://w3id.org/ro/terms/earth-science#score> "77.8" .
<https://www.google.com/accounts/o8/id?id=AItOawmTeIQ2KATi2wWQYhEpoOQ5e06_WUKcbO4>
a <http://xmlns.com/foaf/0.1/Agent>;
<http://schema.org/name> "Kristina Hettne" .
<mailto:service-account-generation-service> a <http://xmlns.com/foaf/0.1/Agent>;
<http://schema.org/name> "service-account-generation-service" .
}
sub:provenance {
sub:assertion prov:wasDerivedFrom <https://api.rohub.org/api/ros/480c3ae2-47ad-4a73-95cb-3eba75a5274c/crate/download/ro-crate-metadata.json> .
}
sub:pubinfo {
this: a npx:RoCrateNanopub;
dct:created "2025-11-11T17:04:59.826+01:00"^^xsd:dateTime;
npx:introduces <https://w3id.org/ro-id/480c3ae2-47ad-4a73-95cb-3eba75a5274c/>;
rdfs:label "Mining KEGG for metabolite-gene relations" .
sub:sig npx:hasAlgorithm "RSA";
npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEA4pPaESKwmC6l37P86K6TNLq6yeQtc7m9CvcqauLs/1FC0viHvQnFBgxj0a+loPDv/Egwe6OqFpa0iW9Ypnyz9YPoh+pxbRXonbuMOb+8Ry9hXZ+TEKfWjhjVDGEaClwfRwglh2HI/xfV4CD9AgvDOEoZQiyta8a90PYwJ3G6e70oCHTn61+OWTkI9KRYHOYgg3btdy2Z7q/30PTFawb2ZT5aIfIJYobUYv2a7yhtcqWCHZeKv0bxGnRjTFNx1rscBMlLJSzvRtpQc1cCRVEPFZHo1adaXCI9tGvn4cxeNQ96y8dxkN1XhpaJairde+23MDzf42Oe97KG2HYzKiyVnQIDAQAB";
npx:hasSignature "c3UaYpQcoVe+x5qToM8hrybUDyZummlctdGwq/KzYbDcnTJ3rmSF0jKUFs6+Yc1OcTm1/jl2aQPEDyz8/PoRNxYXpISUAjexN9IaP/Uxw+poA45AAkUoCEQMghbZQpeAKl3VNlQ0vHa3L80hcXRgRSMN0U115n6TTLzC4FYkx/NyRW6YC/kPtlwPB1SRaduE4ukNyicBTgZfWRs2TnFebYx0eYW21eEHM2wm2GvaUMmgXfiRIZhlgFkknTFb9jWh3WR6BbQkQOmbS8YuTy0EuDN+5QPVsXc24oykDUzQ+S5rpGpd7Rhp2O9GwYuG/iFJUEItUXGvHfSbzQoTusNslA==";
npx:hasSignatureTarget this:;
npx:signedBy <https://w3id.org/kpxl/gen/terms/RoCrateBot> .
}