Nanopublication

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ID

https://w3id.org/np/RArJqTu2lE7v02BrY-UmChPKJEwR004azwXfZhZ3d5ZjQ

Formats

.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt

Content

@prefix this: <https://w3id.org/np/RArJqTu2lE7v02BrY-UmChPKJEwR004azwXfZhZ3d5ZjQ> .
@prefix sub: <https://w3id.org/np/RArJqTu2lE7v02BrY-UmChPKJEwR004azwXfZhZ3d5ZjQ/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix mac: <https://w3id.org/spaces/mac/r/ontology/> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  this: dct:license <https://creativecommons.org/licenses/by/4.0/>;
    <https://w3id.org/fdof/ontology#hasEncodingFormat> <https://www.iana.org/assignments/media-types/application/trig>;
    <https://w3id.org/fdof/ontology#materializes> sub:Alpha-AgMata;
    <https://www.w3.org/ns/dcat#accessURL> this: .
  
  sub:Alpha-AgMata a <https://w3id.org/fdof/ontology#FAIRDigitalObject>, mac:ComputationalPredictionAgMata;
    dct:creator orcid:0000-0001-8888-635X;
    dct:isPartOf <https://w3id.org/np/RAFPOe4OIl_urs-U_7-FostjzcUo8ra6LasfSvGplOvto/StayAhead-Project>;
    dct:publisher <https://ror.org/027bh9e22>;
    dct:source <https://doi.org/10.71728/hw56-vj34>, <https://sen.science/doi/10.71728/hw56-vj34/resources/esm_wuhan_1step_v1>,
      <https://w3id.org/np/RA9YxiABPRNy3rrJm20p1oanJchBcI22IPpSu36zj2MLs>;
    rdfs:comment "Computational prediction of AgMata aggregation propensity score (0.7004717948717948, unitless) for SARS-CoV-2 Spike RBD variant Alpha (N169Y) using the Bio2Byte AgMata predictor. Sequence-derived: one FDO per variant.";
    rdfs:label "Alpha AgMata = 0.7004717948717948 — Bio2Byte";
    <https://w3id.org/fdof/ontology#hasMetadata> this:;
    mac:hasAgMataScore "0.7004717948717948"^^xsd:decimal;
    mac:hasPredictionMethod <https://w3id.org/np/RA3JGJN1R1uTyj1puobq1cEwHT52LNmM_67dzb0oRAz2U/AgMata-Method>;
    mac:isObservationOf <https://w3id.org/np/RA4BHII2Bz7HfpUkaSJqNmhjF8F7hyWpCJnvXYkA4EP_M/Alpha-RBD-Variant>;
    <https://www.w3.org/ns/dcat#contactPoint> "e.a.schultes@lacdr.leidenuniv.nl" .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo orcid:0000-0001-8888-635X .
}

sub:pubinfo {
  this: dct:created "2026-05-28T08:20:53Z"^^xsd:dateTime;
    dct:creator orcid:0000-0001-8888-635X;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:introduces sub:Alpha-AgMata;
    rdfs:label "Alpha AgMata = 0.7004717948717948 — Bio2Byte";
    nt:wasCreatedFromProvenanceTemplate <https://w3id.org/np/RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU>;
    nt:wasCreatedFromPubinfoTemplate <https://w3id.org/np/RA0J4vUn_dekg-U1kK3AOEt02p9mT2WO03uGxLDec1jLw>,
      <https://w3id.org/np/RAMEgudZsQ1bh1fZhfYnkthqH6YSXpghSE_DEN1I-6eAI>, <https://w3id.org/np/RARW4MsFkHuwjycNElvEVtuMjpf4yWDL10-0C5l2MqqRQ>,
      <https://w3id.org/np/RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI>;
    nt:wasCreatedFromTemplate <https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD3w/IUb755GIzp3ueODYkgELhyq4Clygb5Kspge50xo+n8uC/IvXwi+ukRjEpdfX/JZ09yKUCJ2AMMr/QchrsP1Xhg9Q3fEZ4E12XqFd5jX00Qs0K5XZwjBaV8NdDTJW9I4gpcyh0cry7hSBAWHkXEkqbK+lQvR4UFAKejFq6u/wIDAQAB";
    npx:hasSignature "fjHy/chXB9v3Hh6mo6pg8ty7BlInZDRDv5AXUwmOdG0uJbuTxVCDobRdBS0hjEjBR51tUjpKca8IVIYa4GfxLdpN3Jxc+tloCUL8HaYvOzJL7NtzoZvrIhNaOKG7pUc10qmktlvKpkb4ii3bpeJ8n4KDBqZveUHaxjwYYp2bkDQ=";
    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0000-0001-8888-635X .
}