[ { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI/Head", "@graph": [ { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI", "http://www.nanopub.org/nschema#hasAssertion": [ { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI/assertion" } ], "http://www.nanopub.org/nschema#hasProvenance": [ { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI/provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo": [ { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI/pubinfo" } ], "@type": [ "http://www.nanopub.org/nschema#Nanopublication" ] } ] }, { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI/pubinfo", "@graph": [ { "@id": "https://orcid.org/0009-0005-7752-8203", "http://xmlns.com/foaf/0.1/name": [ { "@value": "Tiado Kollender" } ] }, { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI", "http://purl.org/dc/terms/created": [ { "@value": "2026-01-11T23:26:00Z", "@type": "http://www.w3.org/2001/XMLSchema#dateTime" } ], "http://purl.org/dc/terms/license": [ { "@id": "https://creativecommons.org/licenses/by/4.0/" } ], "http://purl.org/dc/terms/source": [ { "@id": "https://doi.org/10.1038/s41467-022-29206-7" } ], "http://purl.org/pav/createdBy": [ { "@id": "https://orcid.org/0009-0005-7752-8203" } ], "http://schema.org/keywords": [ { "@value": "experimental evidence" }, { "@value": "mutant" }, { "@value": "survival" }, { "@value": "ΔcomK" } ], "@type": [ "http://purl.org/nanopub/x/ExampleNanopub" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@language": "en", "@value": "Statement: Experimental Evidence - ΔcomK Phenotype" } ], "http://www.w3.org/ns/prov#wasAttributedTo": [ { "@id": "https://orcid.org/0009-0005-7752-8203" } ] }, { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI/sig", "http://purl.org/nanopub/x/hasAlgorithm": [ { "@value": "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey": [ { "@value": "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAoSR/rqhnkTPQO8u4l2JQAemJo5cN83rT54nA5NXHUqaeu26bEjT/rsX1PCVBhhJ3cV2uu4wjI0NfcVaKPKmODSf6p579tdOykOnjbWLbxxPMe5DC5eV1ThMHsFsNU/6vCYIfS00E7wre7fnFYz7FAG7v1MZEyWeSXsHgk9jHoqQQDPqup5PHReKp1dd6J0Nht/OfSYnUancKAgIFyPhkTlThsLK5xSNyNEgiTR7pwkP5pGq2AnD6bPw4G3kiPnIpIGZNsaeIOvhn64gwbrtoJVdoun/namw6FQ7StEC5km/0evaBZc4qIextwO/s32Wru77ukblJ0Xi/YzbC0iLuIQIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature": [ { "@value": "QnRQVvu39QdDP3IimKGTzLYe6FFDILnD+7hRT3m/v4M4fGxckCSzAIQxjhbH8URnHVEnxQVFHBw6k+9eRictaqBfyIxZIzNIjBstSFySfx3zuGkvAPyltoYs/jYqfGGnTUP8QKyCrOpU/idawPNCgl+YK+epgXVdImIcp+AvXvwjAAAjWkcYEpQau+vGC6PJunzRu/p2GNQ8szc0SWhFjQqRh/ca0GAU2Tet0bdiuLs0H/RMchTeSU/RdTzaiCfVVHGOyHA3uBXmp8sdDY3YHp++t0pVNDd66SG7T42gr6PDxbHzmALmKhpY6unoU0jmlejUfKpAmEQenZ2DUgcWIg==" } ], "http://purl.org/nanopub/x/hasSignatureTarget": [ { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI" } ] } ] }, { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI/assertion", "@graph": [ { "@id": "https://w3id.org/data/naturalcompetence/dna_mutations", "http://schema.org/description": [ { "@language": "en", "@value": "ROS causes serious damage and mutations in ΔcomK mutant DNA" } ], "@type": [ "http://purl.obolibrary.org/obo/GO_0006298" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@language": "en", "@value": "DNA Mutations in Chromosome" } ] }, { "@id": "https://w3id.org/data/naturalcompetence/experimental_evidence", "http://purl.obolibrary.org/obo/BFO_0000050": [ { "@id": "https://w3id.org/data/naturalcompetence/dna_mutations" }, { "@id": "https://w3id.org/data/naturalcompetence/glycolysis_impairment" }, { "@id": "https://w3id.org/data/naturalcompetence/reduced_survival" }, { "@id": "https://w3id.org/data/naturalcompetence/ros_accumulation" } ], "http://schema.org/description": [ { "@language": "en", "@value": "ΔcomK competence-defective mutant shows impaired glycolysis and reduced survival" } ], "@type": [ "http://edamontology.org/data_2603" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@language": "en", "@value": "Experimental Evidence for ComK Function" } ] }, { "@id": "https://w3id.org/data/naturalcompetence/glycolysis_impairment", "http://schema.org/description": [ { "@language": "en", "@value": "ΔcomK mutant shows no increase in glycolysis under ROS exposure" } ], "@type": [ "http://purl.obolibrary.org/obo/GO_0006096" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@language": "en", "@value": "No Glycolysis Increase in ΔcomK" } ] }, { "@id": "https://w3id.org/data/naturalcompetence/reduced_survival", "http://schema.org/description": [ { "@language": "en", "@value": "ΔcomK mutant shows significantly reduced survival in both mouse and Galleria infection models" } ], "@type": [ "http://purl.obolibrary.org/obo/GO_0008150" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@language": "en", "@value": "Reduced Survival in Infection Models" } ] }, { "@id": "https://w3id.org/data/naturalcompetence/ros_accumulation", "http://schema.org/description": [ { "@language": "en", "@value": "ROS accumulates inside ΔcomK mutant due to impaired respiration" } ], "@type": [ "http://purl.obolibrary.org/obo/GO_0019430" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@language": "en", "@value": "Intracellular ROS Accumulation" } ] } ] }, { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI/provenance", "@graph": [ { "@id": "https://doi.org/10.1038/s41467-022-29206-7", "http://purl.org/ontology/bibo/doi": [ { "@value": "10.1038/s41467-022-29206-7" } ], "http://schema.org/datePublished": [ { "@value": "2022", "@type": "http://www.w3.org/2001/XMLSchema#gYear" } ], "http://schema.org/name": [ { "@language": "en", "@value": "Natural Competence in Staphylococcus aureus" } ], "@type": [ "http://purl.org/ontology/bibo/AcademicArticle" ] }, { "@id": "https://w3id.org/np/RAzEy60Cc-hqCkSaDeYy-2H0obpu6KZUTtpwWu-8QQJsI/assertion", "http://www.w3.org/ns/prov#wasAttributedTo": [ { "@id": "https://orcid.org/0000-0002-1481-2996" }, { "@id": "https://orcid.org/0000-0002-6937-6394" }, { "@id": "https://orcid.org/0000-0002-7355-0674" }, { "@id": "https://orcid.org/0000-0002-8627-3813" }, { "@id": "https://orcid.org/0000-0003-2705-4781" } ], "http://www.w3.org/ns/prov#wasDerivedFrom": [ { "@id": "https://doi.org/10.1038/s41467-022-29206-7" } ] } ] } ]