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https://w3id.org/np/RA36ReGfg8_IrkrMd2df9S-Je0cLuC7AXI1p-gMpevNvo

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Content

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sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  sub:glycan-protein-motifs a wd:Q604733;
    dct:description "<span><p>Motivation: We have previously designed and implemented a tree-based ontology to represent glycan structures with the aim of searching these structures with a glyco-driven syntax. This resulted in creating the GlySTreeM knowledge-base as a linchpin of the structural matching procedure and we now introduce a query language, called GlycoQL, for the actual implementation of a glycan structure search.</p><p>Results: The methodology is described and illustrated with a use-case focused on Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) spike protein glycosylation. We show how to enhance site annotation with federated queries involving UniProt and GlyConnect, our glycoprotein database.</p><p>Availability and implementation: https://glyconnect.expasy.org/glycoql/</p></span>";
    dct:isPartOf <https://w3id.org/spaces/rdflinked-data-unige/2023-02-07>;
    pav:authoredBy <https://orcid.org/0000-0002-3640-3237>;
    rdfs:label "Glycan-protein interaction motifs: A semantic based annotation method";
    rdfs:seeAlso <https://academic.oup.com/bioinformatics/article/38/Supplement_2/ii162/6702012>;
    wd:P823 <https://orcid.org/0000-0002-3640-3237>;
    schema:location wd:Q503473;
    schema:startDate "2023-02-07T00:00:00+01:00"^^xsd:dateTime .
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sub:provenance {
  sub:assertion prov:wasAttributedTo <https://orcid.org/0000-0001-8492-0354> .
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sub:pubinfo {
  <https://orcid.org/0000-0002-3640-3237> foaf:name "Catherine Hayes" .
  
  this: dct:created "2026-10-02T13:34:49Z"^^xsd:dateTime;
    dct:creator <https://orcid.org/0000-0001-8492-0354>;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
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    rdfs:label "Presentation: Glycan-protein interaction motifs: A semantic based annotation method";
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